Entering edit mode
6.8 years ago
jonupk6
•
0
Is there any python script to separate/split sdf file(having more than lakhs of compound structure) into smaller size(1000 structure per file))
It would be definitely helpful if you show a snippet of how your file looks like - you can't expect us to know an sdf file by heart.
Check this toolkit out. Otherwise use the suggestion in this thread to convert to PDB format.