how investigate genes after meta-analysis in each experiment
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4.0 years ago
Edalat ▴ 30

hello everyone,

after meta-analysis I want to investigate genes in each experiment,for example I want to know "gene1" that is up-regulated gene in meta-analysis, is up-regulate in each experiment too or not.what should I do? I should determine DEG in each experiment and compare? I should say that I am using noiseq metaseq package, and I can determine DEG by DEseq2.

metaseq meta-analysis DEG DEseq2 • 876 views
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Can you elaborate on what a "meta-analysis" is in your question? It's a broad and flexible term, quite often misused.

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I want to Check out effect of a drug on a cancer of several RNA-seq data.is it enough?

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