Question: Protein blastp .pin file warning
0
gravatar for arunprasanna83
21 months ago by
arunprasanna8330 wrote:

Hello,

I have recently run a blastp. My database size was 1.6 GB. I ran my query and got the output (~300MB). However, I noticed that, the log file had warning lines ..Unable to open *.pin file.

My concern is that, is this a serious case? i.e would it have affected BLAST results ?

Thanks in Advance,

AP

blast protein • 408 views
ADD COMMENTlink modified 21 months ago by Biostar ♦♦ 20 • written 21 months ago by arunprasanna8330
1

Post the commands you used to make the database, and the blastp command.

ADD REPLYlink written 21 months ago by st.ph.n2.4k

This could mean that the database was not found (check the path) or that it was not properly formatted (try running makeblastdb again).

ADD REPLYlink written 21 months ago by Jean-Karim Heriche18k
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