Question: Protein blastp .pin file warning
0
gravatar for arunprasanna83
2.6 years ago by
arunprasanna8330 wrote:

Hello,

I have recently run a blastp. My database size was 1.6 GB. I ran my query and got the output (~300MB). However, I noticed that, the log file had warning lines ..Unable to open *.pin file.

My concern is that, is this a serious case? i.e would it have affected BLAST results ?

Thanks in Advance,

AP

blast protein • 509 views
ADD COMMENTlink modified 2.6 years ago by Biostar ♦♦ 20 • written 2.6 years ago by arunprasanna8330
1

Post the commands you used to make the database, and the blastp command.

ADD REPLYlink written 2.6 years ago by st.ph.n2.5k

This could mean that the database was not found (check the path) or that it was not properly formatted (try running makeblastdb again).

ADD REPLYlink written 2.6 years ago by Jean-Karim Heriche21k
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