How to install ShotgunFunctionalizeR

Question

[zhangzhenyusz]

Hi everyone,

Is there anyone know how to install ShotgunFunctionalizeR? I installed the previous version of R programming but was not able to get bioconductor as R does not recognize both https and http for URL. Then I tried to install ShotgunFunctionalizeR manually by getting all dependencies and I stuck in getting package 'parallel' because it is not available in older version of R. Anyone know how to solve this?

Thanks in advance!

[Santosh Anand]

I installed the previous version of R programming but was not able to get bioconductor as R does not recognize both https and http for URL

What is your version of R and what is the exact error message when you do

source("http://bioconductor.org/biocLite.R")
biocLite()

[zhangzhenyusz]

My version is 2.12 now. Not able to install bioconductor which shotgunfunctionalizer leans on.

source("http://bioconductor.org/biocLite.R") A new version of Bioconductor is available after installing the most recent version of R; see http://bioconductor.org/install Warning in value[3L] : https: failed (cannot open the connection), trying http BioC_mirror = http://bioconductor.org Change using chooseBioCmirror(). Warning message: In file(file, "r", encoding = encoding) : unsupported URL scheme

[Santosh Anand]

Try with http:// protocol instead of https:// ?

[zhangzhenyusz]

I actually used "http://". That's why I so confused.