Question: Can I get BLAST results from commandline BLAST+ in complete and aligned FASTA format?
0
gravatar for rmartson
2.1 years ago by
rmartson0
rmartson0 wrote:

I use Biopython to run BLAST and work with the results so if it's possible with that it'd be useful.

blast biopython • 737 views
ADD COMMENTlink written 2.1 years ago by rmartson0

What sequences are you blasting? Sounds more like you want a multi-sequence alignment.

ADD REPLYlink written 2.1 years ago by st.ph.n2.5k

One viral LTR sequence against the entire human genome and then multiple of those results against the chimpanzee genome to find homologs.

ADD REPLYlink written 2.1 years ago by rmartson0
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1380 users visited in the last hour