Question: RNA-seq HEK293T recent datasets
0
gravatar for Sergio Martínez Cuesta
5 months ago by
Cambridge, UK

Dear all,

I am currently exploring ArrayExpress/GEO for relevant datasets, but I was wondering if anyone is aware/have used any recent RNA-seq datasets involving the human cell line HEK293T?

The classical datasets are from 2008 and 2010:

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE11892

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13474

However I was wondering if you are familiar with anything that is more recent.

Thanks, Sergio

rna-seq hek293t • 309 views
ADD COMMENTlink modified 4 months ago by vivekbhr480 • written 5 months ago by Sergio Martínez Cuesta30
2
gravatar for vivekbhr
4 months ago by
vivekbhr480
Germany
vivekbhr480 wrote:

We have both polyA plus and minus RNAseq on HEK293T cells, published recently : https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE85161

ADD COMMENTlink written 4 months ago by vivekbhr480

Thanks vivekbhr. Are your data collected for HEK293 or HEK293T? Do these two cell lines have a significant difference in transcriptome?

ADD REPLYlink written 7 weeks ago by huhl160
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