Question: Allele frequency calculation for genotype dosage value
gravatar for drsachinbioinfo
3.3 years ago by
drsachinbioinfo20 wrote:

Hi, every one

I have genotype dosage value between 0-2 and now I am interested to calculate Allele frequency through that. Any one has thoughts for that kindly let me know.

snp • 1.5k views
ADD COMMENTlink modified 4 weeks ago by Biostar ♦♦ 20 • written 3.3 years ago by drsachinbioinfo20

You are going to have to convert those dosages to "hard calls", like by rounding to the nearest 0,1,or2. These rounded values can be used to calculate allele frequency

ADD REPLYlink written 29 days ago by curious450
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