This is my code which i m using to create a distance matrix from my expression value
gendat = read.csv('PRIMARY_CELL_UBI (copy).csv',row.names = 1) gen <- t(gendat) dd <- as.dist((1 - cor(gen, method='spearman')/2)) View(dd)
I would like to plot something like this since my expression data consist of two condition compared with normal Im not sure if i can pass the data and plot is a heatmap or how do i proceed ?
I would like to get the cluster of genes that is formed when i make the distance matrix
Any suggestion or help would be highly appreciated