I used Trinity to create a fasta file for my transcriptome, which I then mapped to the genome. Unfortunately, there are a lot of single exon reads in the BAM file which appear to just be junk. Does anyone know of a good way to filter these out? I can do it manually, but I really don't want to do that for a full BAM file.
Question: Filter single exon reads
2.2 years ago by
sloux • 0
University of Kentucky
sloux • 0 wrote:
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