Question: How to install Arlequin R package?
0
gravatar for Pinter
3.0 years ago by
Pinter0
Pinter0 wrote:

Hello,

How can I install the R package of Arlequin? I have been looking for so long but I can't find the package name..

Thanks

R • 3.4k views
ADD COMMENTlink modified 3.0 years ago by grant.hovhannisyan2.0k • written 3.0 years ago by Pinter0

Are you sure there is a R package of Arlequin?

ADD REPLYlink written 3.0 years ago by h.mon30k
0
gravatar for Carlo Yague
3.0 years ago by
Carlo Yague5.0k
Canada
Carlo Yague5.0k wrote:

There is a function to create arlequin files in the package strataG. If this is what you are looking for, try

install.packages('strataG')

Edit : have you tried a simple search on RDocumentation ? There are a few functions to work with arlequin files.

ADD COMMENTlink modified 3.0 years ago • written 3.0 years ago by Carlo Yague5.0k

I am trying to make graphs from my Arlequin results files (I already have my arlequin files)

ADD REPLYlink written 3.0 years ago by Pinter0
1

FST results for instance? In that case, you have to go to Arlequin configuration on your above panel -> Rcmd-> Browse your R package on your computer

Hope this helps

ADD REPLYlink written 3.0 years ago by carlopecoraro21.8k

What kind of graphs ?

ADD REPLYlink written 3.0 years ago by Carlo Yague5.0k
0
gravatar for h.mon
3.0 years ago by
h.mon30k
Brazil
h.mon30k wrote:

From http://cmpg.unibe.ch/software/arlequin35/:

03.02.2013

Release of new R functions for R package ver 3.01 here. The zip file contains a directory called Rfunctions, which needs to replace the Rfunctions directory located in your Arlequin home directory. If you have already installed Arlequin and update your R package to ver 3.01 (latest version in June 2013), then this update is necessary to be able to produce graphics in your xml files

Maybe this is what you are looking for?

ADD COMMENTlink modified 3.0 years ago • written 3.0 years ago by h.mon30k
0
gravatar for grant.hovhannisyan
3.0 years ago by
grant.hovhannisyan2.0k wrote:

You are either looking for arlecore or for generating R-plots of different results in XML file using Rcmd. (in the latter look for chapter 7.8 XML output file)

ADD COMMENTlink written 3.0 years ago by grant.hovhannisyan2.0k
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