How to install Arlequin R package?

Question

[Pinter]

Hello,

How can I install the R package of Arlequin? I have been looking for so long but I can't find the package name..

Thanks

[h.mon]

Are you sure there is a R package of Arlequin?

Answer 1

[Carlo Yague]

There is a function to create arlequin files in the package strataG. If this is what you are looking for, try

install.packages('strataG')

Edit : have you tried a simple search on RDocumentation ? There are a few functions to work with arlequin files.

[Pinter]

I am trying to make graphs from my Arlequin results files (I already have my arlequin files)

[carlopecoraro2]

FST results for instance? In that case, you have to go to Arlequin configuration on your above panel -> Rcmd-> Browse your R package on your computer

Hope this helps

[Carlo Yague]

What kind of graphs ?

Answer 2

[h.mon]

From http://cmpg.unibe.ch/software/arlequin35/:

03.02.2013

Release of new R functions for R package ver 3.01 here. The zip file contains a directory called Rfunctions, which needs to replace the Rfunctions directory located in your Arlequin home directory. If you have already installed Arlequin and update your R package to ver 3.01 (latest version in June 2013), then this update is necessary to be able to produce graphics in your xml files

Maybe this is what you are looking for?

Answer 3

[grant.hovhannisyan]

You are either looking for arlecore or for generating R-plots of different results in XML file using Rcmd. (in the latter look for chapter 7.8 XML output file)