I already know that you can use the first and second in pair information from the sam FLAG, but it works only if you have one pair of paired-read files. I need to do this for multiple pairs and/or single end reads. Any one know an efficient work around? Thanks!
Question: From sam data, how do I tell from which fastq file each read came from?
2.2 years ago by
bitjunkie • 40
bitjunkie • 40 wrote:
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