AnnotationDbi using UCSC annotation
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6.8 years ago
jadepinket ▴ 10

Below is the error I get, any suggestions would be helpful

res$symbol <- mapIds(TxDb.Hsapiens.UCSC.hg38.knownGene, keys=row.names(res), column="CDSNAME", keytype="TXID", multiVals="first")

Error in .testForValidKeys(x, keys, keytype, fks) : None of the keys entered are valid keys for 'TXID'. Please use the keys method to see a listing of valid arguments.

RNA-Seq AnnotationDbi UCSC • 1.9k views
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