I use the following command to annotate vcf files:
table_annovar.pl example/ex2.vcf humandb/ -buildver hg19 -out myanno -remove -protocol refGene,cytoBand,exac03,avsnp147,dbnsfp30a -operation g,r,f,f,f -nastring . -vcfinput
but unfortunately I see the COSMIC and CLINVAR annotations are missing.
How can I include them? Please let me know. Thanks