Population Genetics Data analysis using Arlequin

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6.7 years ago

Inquisitive8995 ▴ 270

Hi All, I am trying to find the Fst and Distance between population datasets using the Arlequin tool. It requires files in .arp format whereas i have the files in Plink ped & map formats and binary files. I used PGDSpider to convert it to .arp format but it shows an error saying "unable parse data: Not enough memory" I used the command given in manual to increase the space but still face the same problem. Is there any other way with which i can convert plink files to .arp format ? Is there any other tool which can aid in this process ?? Hope to receive an answer soon. Thanks in advance

Population Genetics Arlequin PGDSpider • 3.0k views

ADD COMMENT • link updated 6.0 years ago by HG ▴ 30 • written 6.7 years ago by Inquisitive8995 ▴ 270

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Hi, I got the same error!Did you find any solution for that?

ADD REPLY • link 6.0 years ago by HG ▴ 30

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Arlequin appears to be no longer supported. Take a look at my comment here: C: Convert Plink to Arlequin

ADD REPLY • link 6.0 years ago by Kevin Blighe 87k

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