Question: WGS human normal panel
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gravatar for benjaminnguyen90
19 months ago by
benjaminnguyen900 wrote:

We would like to calls CNVs from some human cancer cell lines (paired reads and WGS 5x coverage) utilizing GATK. We would like to obtain the normal panel (paired reads and WGS 5x coverage). Could you please point us to one ?

cnv normal panel • 641 views
ADD COMMENTlink modified 19 months ago by Emily_Ensembl17k • written 19 months ago by benjaminnguyen900

several vendors offer "comprehensive cancer panel" with different sets of panel genes. I would suggest COSMIC comprehensive list, if you are interested in cancer variants.

ADD REPLYlink modified 19 months ago • written 19 months ago by cpad011211k
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