I am a rookie in computational biology and am learning on using python to do some analysis. Could any one give me some advise in the following questions? Thanks a lot!!
In bacteria genome, the 200-300bp before coding sequence (CDS) are usually the regulatory region. There are about 5000 annotated CDS in a certain bacteria strain and I would like to output all the 5000 regulatory regions for the CDS. Is there a package or developed scripts to do so?
Thanks a lot!