Question: Error to install GMAP 2017
0
gravatar for irving.jgalo23
2.8 years ago by
irving.jgalo230 wrote:

Hi guys

Can you help me?, im trying to install GMAP, the latest version, but when Im compiling the program with the 'make' command, i get the next error :

/usr/bin/ld: //usr/local/lib/libbz2.a(bzlib.o): relocation R_X86_64_32S against `BZ2_crc32Table' can not be used when making a shared object; recompile with -fPIC
//usr/local/lib/libbz2.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
Makefile:3502: fallo en las instrucciones para el objetivo 'libgmap.la'
make[2]: *** [libgmap.la] Error 1
make[2]: se sale del directorio '/home/irving/Descargas/gmap-2017-08-15/src'
Makefile:3417: fallo en las instrucciones para el objetivo 'all'
make[1]: *** [all] Error 2
make[1]: se sale del directorio '/home/irving/Descargas/gmap-2017-08-15/src'
Makefile:430: fallo en las instrucciones para el objetivo 'all-recursive'
make: *** [all-recursive] Error 1

What's going on? Could you help me? Thanks

make gmap • 1.1k views
ADD COMMENTlink written 2.8 years ago by irving.jgalo230

//usr/local/lib/libbz2.a(bzlib.o): relocation R_X86_64_32S against `BZ2_crc32Table' can not be used when making a shared object; recompile with -fPIC

Did you see that? What flavor of unix are you using?

ADD REPLYlink written 2.8 years ago by genomax83k

If you refers to the unix operating system, Im using Linux

ADD REPLYlink written 2.8 years ago by irving.jgalo230

Have you tried installing using (bio)conda?

ADD REPLYlink written 2.8 years ago by WouterDeCoster43k
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