Question: LOSITAN only recognising one loci from STACKS genepop file
gravatar for jamierobertsells
19 months ago by
jamierobertsells0 wrote:

Hi all,

I'm trying to analyse SNP data created within STACKS and out put from STACKS within genepop format for Lositan. When I import the data, Lositan only seems to identify 1 loci, and in fact this almost seems to be the header information in the genpop file. I created the genpop file on Linux for use on a windows machine and have tried running the file as straight output, and also a unix 2 dos conversion, but still only 1 locus of 600 is reocgnised. Any thoughts?

Many thanks


lositan stacks outlier • 485 views
ADD COMMENTlink written 19 months ago by jamierobertsells0

Hi Jamie. I have the same problem here. Did you find a solution for that problem? It was already a nightmare to install this program and now this...

ADD REPLYlink written 12 months ago by cordeiro.emg0
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