Question: finding common Chip-seq motif from different species
gravatar for kanwarjag
2.6 years ago by
United States
kanwarjag1.0k wrote:

I have a TF and am checking its enrichment across human (main aim) mouse and Rat public datasets. I have identified genes (homologous) and has a list of binding peaks. Now if I have to find a common binding motif what should be my approach should I take seq corresponding to respective genomes combine them and quarry for human motif or I cannot find common binding motif across different species?


chip-seq • 666 views
ADD COMMENTlink written 2.6 years ago by kanwarjag1.0k
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 977 users visited in the last hour