finding common Chip-seq motif from different species
0
0
Entering edit mode
6.6 years ago
kanwarjag ★ 1.2k

I have a TF and am checking its enrichment across human (main aim) mouse and Rat public datasets. I have identified genes (homologous) and has a list of binding peaks. Now if I have to find a common binding motif what should be my approach should I take seq corresponding to respective genomes combine them and quarry for human motif or I cannot find common binding motif across different species?

Thanks

ChIP-Seq • 1.0k views
ADD COMMENT

Login before adding your answer.

Traffic: 2639 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6