I'm trying out DEXSeq for the identification of differentially expressed/spliced transcripts for my samples. I am comparing two tissues. I got the results and plots using DEXSeq by executing following command;
plotDEXSeq(dxr, "gene-name", displayTranscripts=T, names=T, legend=T)
But I am trying to identify transcripts which are present in each condition for each gene based on the resulting plots. For example,
from the results, Is there anyway i can identify tissue specific transcripts using DEXSeq?