Hi Everyone, I have 2 different samples and one Control (Sample_A, Sample_B and Control) and two replicates for each. So the data matrix I have contains six different columns for fold counts for Sample_A1, Sample_A2, Sample_B1, Sample_B2, Control_1, Control_2. I want to know how I can use DESeq2 tool for this data matrix and do my RNAseq analysis. Can someone please clarify. Thanks.