Entering edit mode
5.8 years ago
Sara ▴ 220
I have aligned RNAseq data and now I have bam files for control and treated conditions. I am trying to get the frequency of each nucleotide at each position in a sequence of 95 nt. to get the mutation rate at each position. except for the igv, is there any way to do that?
I think you are referring to calling variant ?!