Downloading the latest human genome
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3.8 years ago
KVC_bioinfo ▴ 550

Hello,

I want to download the entire latest human genome for using it as a reference in mapping to RNA-seq data. I am aware that I can do that with the following link:

Download human genome

However, I want one fasta file with all chromosomes. Is there any way to download it ? or I have to download individually and concatenate it?

Thank you in advance

#humangenome #download #fasta • 6.9k views
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Thank you very much!

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This does not give me one file.

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Link has been updated. Try now.

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That is an old release that is no longer available. This is the latest.

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3.8 years ago
Satyajeet Khare ★ 1.6k

Just check the Readme file in the same folder. I guess you need Primary or Toplevel file. Look up for more information in case and decide accordingly.

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3.8 years ago
tiago211287 ★ 1.3k

There are many places to download the full human genome, I suggest gencode:

Genome sequence, primary assembly (GRCh38)

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3.8 years ago
shoujun.gu ▴ 370

Gencode is my favorite clean and clear

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