Question: Examine a specific gene in WGCNA
0
gravatar for Yi.Zhou
2.7 years ago by
Yi.Zhou0
Yi.Zhou0 wrote:

Hi all,

I'm new to gene coexpression network analysis, and what I'm trying to do here is to construct a network with a given hub gene (the one I'm interested in) using RNA-Seq data from TCGA. Is there a way to pick out genes around my hub gene in WGCNA, or are there other methods?

Thanks!

wgcna coexpression R • 1.1k views
ADD COMMENTlink modified 2.7 years ago • written 2.7 years ago by Yi.Zhou0

Wouldn't extract the modules is the first step to do?

ADD REPLYlink written 2.7 years ago by aka001190
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