Entering edit mode
6.6 years ago
anaritagrosso
•
0
Hi,
I would like to obtain the read coverage from a bam file containing RNA-seq strand-specific and paired-end data. The coveragebed tool can not distinguish the strand-specific information from paired-end data (i.e. only consider the forward or reverse read strand information).
Anyone has a suggestion to easily obtain the coverage?
Thank you
Ana Rita Grosso