Question: Cufflinks analysis of Tophat BAM file
0
gravatar for qudrat
3.1 years ago by
qudrat70
NATIONAL INSTITUTE OF IMMUNOLOGY, INDIA
qudrat70 wrote:

Very often I see at the end of Cufflinks run Waiting for 1 threads to complete. [ ******* ] 99% and it takes too much time. Can somebody shed light on this

rna-seq assembly • 637 views
ADD COMMENTlink written 3.1 years ago by qudrat70
1

You should check to see if the process is still running through the top command in linux (may be the same for MAC, too).

It is normal for it to get 'stuck' at 99% as it tidies up files and pieces everything back together. Transcriptome assembly is no easy feat.

ADD REPLYlink written 3.1 years ago by Kevin Blighe66k
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