Entering edit mode
7.0 years ago
saj98
▴
140
Hello I am trying to build my index to HISAT2 using the following command
hisat2-build rn6_ercc/genome.1.ht2,genome.2.ht2,genome.3.ht2,genome.4.ht2,genome.5.ht2,genome.6.ht2,genome.7.ht2,genome.8.ht2 ht2_base
I got the following errors
Error: could not open genome.2.ht2
and
Error: Encountered internal HISAT2 exception (#1)
Kindly help
Based on your command it looks like you already have the index files (.ht2)?