Different binding pockets from softwares
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4.1 years ago

I used two sotwares Autodock Vina and Patchdock for blind docking. Both gives different binding pockets and interacting residues for same ligand and receptor. Even on repeating the result is same. Which software result should I consider to be accurate?

protein Structure Docking softwares • 1.1k views
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New versions are not freely available.

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Not the AutoDock, a different docking software.

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4.1 years ago
Bioaln ▴ 350

Autodock is severely outdated, use the most recent one.

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