Question: Tool to segment genome according to SNP density?
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gravatar for abascalfederico
2.0 years ago by
abascalfederico1.1k
Spain
abascalfederico1.1k wrote:

Can anyone recommend a tool to segment the genome according to SNP density (using HMM-based segmentation, for example)?

Thanks!

segmentation snp density hmm • 578 views
ADD COMMENTlink modified 2.0 years ago by Biostar ♦♦ 20 • written 2.0 years ago by abascalfederico1.1k

You will have to expand on this a bit...

Are you referring to all 'known' SNPs that are listed in dbSNP?; or are you referring to a dataset that you've already got (in which case, in which data format is it?).

Thanks!

Kevin

ADD REPLYlink written 2.0 years ago by Kevin Blighe49k
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