Matched normal necessary for Battenberg algorithm
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6.5 years ago
cbst ▴ 160

I am looking into using the Battenberg algorithm to infer subclonal copy number alterations in tumor samples. I was wondering whether it is necessary to have Affymetrix SNP6.0 array data for matched normal in order to use the algorithm, or is it enough with SNP6.0 data for tumor sample only.

SNP Clonality copy number • 1.9k views
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