i have installed all the dependency package for alitv as per the github instruction. i want to create image for custom genomes. i have made yml file as per the tutorials.
i am getting following error
FATAL - Unable to load alignment module 'AliTV::Alignment::lastz' at /data/ngs/programs/AliTV-perl-interface/bin/../lib/AliTV/Script.pm line 123.
Googling didnt help. anyone who has used it please let me know how to fix the error. Or any other tools which generates similar image? Mauve/ contiguator / synmap apart from these.