Question: Regarding p-value for calculating enrichment in MapMan software
gravatar for pixie@bioinfo
3.3 years ago by
Université Paris, Saclay
pixie@bioinfo1.4k wrote:


Is there anyone using the MapMan pathway /ontology analysis software ? I am having trouble to understand how are the p-values calculated using the Wilcoxon Rank Sum Test. I uploaded a list of genes (both DEGs and non-DEGs). It calculated p-values for the bins. For one such bin, i noticed that even though the genes were not deferentially expressed, it gave a significant p-value. What could be the possible reason for this ?

mapman • 1.1k views
ADD COMMENTlink modified 3.3 years ago • written 3.3 years ago by pixie@bioinfo1.4k
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