Regarding p-value for calculating enrichment in MapMan software
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3.5 years ago
pixie@bioinfo ★ 1.4k

Hello,

Is there anyone using the MapMan pathway /ontology analysis software ? I am having trouble to understand how are the p-values calculated using the Wilcoxon Rank Sum Test. I uploaded a list of genes (both DEGs and non-DEGs). It calculated p-values for the bins. For one such bin, i noticed that even though the genes were not deferentially expressed, it gave a significant p-value. What could be the possible reason for this ?

mapman • 1.1k views
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