Question: Stringtie and Cufflinks and Cuffmerge
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gravatar for qudrat
17 months ago by
qudrat60
NATIONAL INSTITUTE OF IMMUNOLOGY, INDIA
qudrat60 wrote:

Can Cuffmerge be used to merge different gtf files produced from Stringtie as I have fourteen gtf files from Stringtie

rna-seq assembly • 1.1k views
ADD COMMENTlink modified 17 months ago by kristoffer.vittingseerup1.6k • written 17 months ago by qudrat60
1
gravatar for kristoffer.vittingseerup
17 months ago by
European Union
kristoffer.vittingseerup1.6k wrote:

Yep. But if you look at the figures on https://ccb.jhu.edu/software/stringtie/index.shtml?t=manual you seen they suggest to use stringtie -merge.

ADD COMMENTlink written 17 months ago by kristoffer.vittingseerup1.6k
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