Question: Where to find a list of rat protein coding genes?
0
gravatar for chahat_u
12 months ago by
chahat_u70
United States
chahat_u70 wrote:

I have a list of rat genes and I wanted to filter out the protein coding genes from that (It also has antisense RNA, lnc RNA, snRNA... etc.). So for that I needed a list of all protein coding genes in rat. Where can I get this list?

I do know that for human and mouse, it can be obtained from GenCode, but it does not have files for rat.

Any help would be great!

gene-list rat genome • 499 views
ADD COMMENTlink written 12 months ago by chahat_u70
2
gravatar for genomax
12 months ago by
genomax57k
United States
genomax57k wrote:

Use BioMart from Ensembl. Ensembl Genes --> Rat Genes --> Filter for the type of genes you need under Filters --> Genes --> Gene Types.

ADD COMMENTlink written 12 months ago by genomax57k

Thank you so much, Biomart is awesome! And so is Biostars!

ADD REPLYlink written 12 months ago by chahat_u70
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1755 users visited in the last hour