Where to find a list of rat protein coding genes?
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4.0 years ago
c_u ▴ 480

I have a list of rat genes and I wanted to filter out the protein coding genes from that (It also has antisense RNA, lnc RNA, snRNA... etc.). So for that I needed a list of all protein coding genes in rat. Where can I get this list?

I do know that for human and mouse, it can be obtained from GenCode, but it does not have files for rat.

Any help would be great!

rat genome gene-list • 1.5k views
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4.0 years ago
GenoMax 108k

Use BioMart from Ensembl. Ensembl Genes --> Rat Genes --> Filter for the type of genes you need under Filters --> Genes --> Gene Types.

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Thank you so much, Biomart is awesome! And so is Biostars!

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