Question

What is the most usefull and up to date Prokaryotic Genome annotation Pipeline?

0

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6.5 years ago

mhmtgenc85 ▴ 50

Dear Collegues,

I would like to know What is the most usefull and up to date Procaryotic Genome annotation Pipeline? I had a whole genome sequencing of a 1,8 Mb bacteria and did an assembly on it and now I have the assembled whole genome sequence. and would like to do a genome annotation so please help me on this as I am beginner. Thanks in advance.

genome annotation NGS prokaryote WGS • 1.4k views

ADD COMMENT • link updated 6.5 years ago by Philipp Bayer 8.3k • written 6.5 years ago by mhmtgenc85 ▴ 50

score 1 · Answer 1 · 2017-10-17

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6.5 years ago

Philipp Bayer 8.3k

Prokka!

GitHub link

It's easy to use, is often updated, makes all usual files in formats ready for submission to Genbank

ADD COMMENT • link 6.5 years ago by Philipp Bayer 8.3k