Question: How to download to Bacterial genome sequences database in NCBI
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gravatar for park.seojeong2
8 months ago by
park.seojeong20 wrote:

Hi everyone.

Bacterial genome database in NCBI was downloaded using FTP.

I was followed the NCBI site, so i used command line that "wget --recursive --no-host-directories --cut-dirs=6 ftp://ftp.ncbi.nlm.nih.gov/genomes/all/ -P my_dir/"

And i can get this mention; Removed ‘my_dir/.listing’. FINISHED --2017-10-23 07:38:32-- Total wall clock time: 3d 15h 39m 18s Downloaded: 3 files, 44K in 2m 55s (259 B/s)

Final downloaded file is only three; README.txt, README_assembly_structure.txt, README_change_notice.txt

Is that right commend line i used results?

Or do i need more steps if i want genome sequence database?

rna-seq tool alignment genome • 434 views
ADD COMMENTlink modified 8 months ago by theobroma221.1k • written 8 months ago by park.seojeong20
0
gravatar for theobroma22
8 months ago by
theobroma221.1k
theobroma221.1k wrote:

An easier way may be to just use the NCBI/Genomes website and download that way.

ADD COMMENTlink written 8 months ago by theobroma221.1k
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