Question

SNPs and Gene Expression

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Entering edit mode

6.5 years ago

cased • 0

Hello!

I'm a PhD student and I have been working with gene expression, so I have a group of DEGs. Furthermore, I want to add the SNP analysis for my DEGs but I have never worked with the SNPs. How can I do this? and What tools do you recommend me for SNPs analysis?

Thanks you in advanced.

Best regards.

RNA-Seq SNP R genome • 1.2k views

ADD COMMENT • link updated 6.5 years ago by tarek.mohamed ▴ 360 • written 6.5 years ago by cased • 0

score 0 · Answer 1 · 2017-10-25

0

Entering edit mode

6.5 years ago

tarek.mohamed ▴ 360

Hi,

Are you trying to do an eqtl? ie. investigate which snps are associated with alteration in genes expression.

T

ADD COMMENT • link 6.5 years ago by tarek.mohamed ▴ 360