Question

Loading a genome in BSgenome

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6.5 years ago

deepti1rao ▴ 50

Is it possible to load a genome assembled by me (sequence not submitted to any database yet) in the BSgenome package for further study? How?

BSgenome Bioconductor genome assembly • 2.2k views

ADD COMMENT • link updated 2.6 years ago by josev.die ▴ 60 • written 6.5 years ago by deepti1rao ▴ 50

score 1 · Answer 1 · 2017-10-26

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6.5 years ago

josev.die ▴ 60

Same question here. Please, let us know if you figure out how to do it.

ADD COMMENT • link 6.5 years ago by josev.die ▴ 60

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ADD REPLY • link 2.6 years ago by xiaoleiusc ▴ 140

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Hi. You are right. We followed that vignette to forge our custom genomes :

ADD REPLY • link 2.6 years ago by josev.die ▴ 60