Question: suggested value for SP (Phred-scaled strand bias P-value) Samtools mpileup
gravatar for filippo.martignano
18 months ago by
filippo.martignano10 wrote:

Hi everyone!

i'm setting up the --output-tags in my samtools mpileup command line. I want also to include SP (Phred-scaled strand bias P-value), according to the samtools documentation ( it seems that SP needs a value inside the square brackets. in the documentation it is reported SP [null], should i leave "null" as a default vale or should i change it? any suggestion?

Thank you very much.

mpileup strand bias samtools sp • 720 views
ADD COMMENTlink written 18 months ago by filippo.martignano10
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