Question: SAMtools installation on windows
0
gravatar for amy16
10 months ago by
amy1630
amy1630 wrote:

How to install SAMtools on Windows 10? I have downloaded it though but unable to run it.

rna-seq samtools • 2.8k views
ADD COMMENTlink modified 10 months ago by Samarth Kulshrestha160 • written 10 months ago by amy1630

You can only install it under ubuntu bash shell in Win 10. Is that what you are referring to?

ADD REPLYlink written 10 months ago by genomax55k

Oh !!! I wanted to use it on Windows and not on Linux.

ADD REPLYlink written 10 months ago by amy1630
1
gravatar for mittu1602
10 months ago by
mittu1602150
India
mittu1602150 wrote:

Refer to this post on BOW (Bioinformatics for winows)

ADD COMMENTlink modified 10 months ago • written 10 months ago by mittu1602150
1
gravatar for Samarth Kulshrestha
10 months ago by
India
Samarth Kulshrestha160 wrote:

Hi,

You might be interested in knowing that Windows 10 offers a new feature, A full, Ubuntu-based Bash shell that can run Linux software directly on Windows.

https://msdn.microsoft.com/en-us/commandline/wsl/about

https://www.howtogeek.com/265900/everything-you-can-do-with-windows-10s-new-bash-shell/

This will be helpful to you for your windows 10 based NGS analysis.

Best

ADD COMMENTlink written 10 months ago by Samarth Kulshrestha160
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