Question: trinity installation command
0
gravatar for eyonesi
9 months ago by
eyonesi0
eyonesi0 wrote:

Hi I am trying to install trinity protocol but I don’t know how I can write following command with my directories. export TRINITY_HOME=/path/to/trinity/installation/dir

I am new in Linux, Please help me with the explanation of details of this command thankyou

rna-seq • 397 views
ADD COMMENTlink modified 9 months ago by Ram17k • written 9 months ago by eyonesi0
1
gravatar for Ram
9 months ago by
Ram17k
Houston, TX
Ram17k wrote:

Linux "installation" is just adding the location of a file to the PATH environment variable after you ready the executable for a program. If the shell can find an executable file with the same name as your command on a directory listed in the PATH variable, it will execute that file.

Here, you're adding the path to the trinity binaries to an environment variable named TRINITY_HOME. Let's say you downloaded the tar.gz file to ~/Downloads and then built it, the binary would be in some location under your current working directory (~/Downloads/Trinity=*). I'd recommend running find $PWD -name "Trinity" -type f. The manual says you should see the file in the directory you extracted the tar.gz contents to, so the find may not even be required.

ADD COMMENTlink written 9 months ago by Ram17k
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