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7.3 years ago
zhaolin20042008
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10
Hello, I am new in LD analysis. I have a snp list from different chromosomes and a list of regions (less than +/- 5000 bp to snps) for LD calculation. The1000g dataset is a folder including the bed, bim, fam files of different chromosomes, the prefix name is chrXX_EUR. How could I input the folder of binary files together to plink as --bfile mydata?
Thanks