Detect small deletion
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6.4 years ago
martyferr90 ▴ 30

Hi all!

I just need an advice: I have to investigate on small deletions that cause a various diseases, and in particular in prenatal testing. Which software could I use? Is there a software where you can insert a list of genes to investigate for this microdeletions?

Thank you for your answer!

prenatal-analysis deletion next-gen • 1.2k views
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Hello martyferr90!

It appears that your post has been cross-posted to another site: http://seqanswers.com/forums/showthread.php?t=79034

This is typically not recommended as it runs the risk of annoying people in both communities.

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If you are sequencing the whole genome then you would have to align against the whole genome and then perhaps use something like ABRA to do microassemblies/realignment of the data.

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