Entering edit mode
6.4 years ago
hxtao
•
0
#!/bin/bash
#PBS -q longlong
#PBS -l nodes=1:ppn=5
if [ -n "$PBS_O_WORKDIR" ]; then
cd $PBS_O_WORKDIR
fi
for i in $(seq 233515 315320599)
do
plink --bfile tg2\
--chr 1
--from-bp ${i}\
--to-bp ${i+1000000} \
--allow-no-sex \
--make-bed\
--out tg${i}
done
I used plink to make markers into 1Mb windows .The command like this,but I got no answers.I don't know why this happened.