Hi I'm running GSEA on my pre-ranked genes consisting 260 differentially expressed genes following GSEA instructions, but it is obscure for me how to set max and min size for exclude gene set. In GSEA user guide it's noticed that
"defaults that are appropriate for datasets with 10,000 to 20,000 features. To change these default values, use the Max Size and Min Size parameters on the Run GSEA Page..."
Now, I don't know in my case with 260 genes how these values should be set to be appropriate for my data
Thank in advance