I would like to visualize all KEGG metabolic reactions (thinking of Cytoscape, but maybe you know of others?).
I am aware of KGML readers and parsers, but I would like to go over that layer of individual pathways and KOs. Basically, what I would like is to input the network created by this rest call
And visualize that, or part of that. Does anyone know of a way to parse a list of KEGG reactions into a format that would be possible to read in Cytoscape or other network visualisation software?
Thanks in advance!