Where can I get sample NGS assembly data?

Question

[cmlapid]

Where can I get sample NGS data for teaching/illustration purposes?

I need to put together a sample genome assembly, with the following components: - A reference sequence in FASTA format, - NGS read files that had been used to assemble the reference, in FASTQ format, - A completed annotation of genes/features, in GFF format

The genome can be for pretty much any organism, but for the sake of convenience I would very much prefer a small genome, such as for a virus or bacterium.

Any help would be much appreciated!

Answer 1

[BioinfGuru]

The ENCODE data search tool should give you what you need.

Select by organism and assay type