Question: MDS plot based on FPKM values in RNA-seq data
0
gravatar for Mehmet
7 weeks ago by
Mehmet230
Japan
Mehmet230 wrote:

Dear All,

I would like to perform a MDS plot based on FPKM values in a matrix data produced from RNA-seq. in the data there are 17 samples and ~15000 genes.

Could you please help me how to perform a MDS plot in R a step by step?

Thank you.

rna-seq R gene • 153 views
ADD COMMENTlink written 7 weeks ago by Mehmet230
2
gravatar for Nicolas Rosewick
7 weeks ago by
Belgium, Brussels, Université Libre de Bruxelles / Université de Liège
Nicolas Rosewick6.0k wrote:

https://www.statmethods.net/advstats/mds.html

ADD COMMENTlink written 7 weeks ago by Nicolas Rosewick6.0k
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