Question: small molecule alignment/superimposition over docked pose
0
gravatar for amoltej
19 months ago by
amoltej90
Australia
amoltej90 wrote:

Hi,

I have generated docking poses using chimera and autodock vina. I have a separate different type glucosinolate molecule which I want to superimpose on the ligand of docked pose. Can somebody suggest me any software that I can use for this purpose? I have tried small molecule alignment function in discovery studio visualizer but it does not allow to superimpose the structure

ADD COMMENTlink modified 19 months ago by YaGalbi1.4k • written 19 months ago by amoltej90
0
gravatar for YaGalbi
19 months ago by
YaGalbi1.4k
Biocomputing, MRC Harwell Institute, Oxford, UK
YaGalbi1.4k wrote:

I would try Pymol with the Autodock plugin. Load the molecules and use the "align" command to superimpose them.

ADD COMMENTlink written 19 months ago by YaGalbi1.4k
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