Tool: prettysam: a SAM/BAM prettifier
6
gravatar for Pierre Lindenbaum
13 months ago by
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum116k wrote:

I've written a SAM/BAM prettifier, mainly for talking about some SV reads with my colleagues and for educational pruposes.

http://lindenb.github.io/jvarkit/PrettySam.html

enter image description here

I did not really intend to talk about this tool but as my post gets many retweet on twitter, I imagine it is of interest among people handling long reads.

Enjoy,

P.

tool sam bam java formatting • 513 views
ADD COMMENTlink written 13 months ago by Pierre Lindenbaum116k

Can you please check the URL, I am unable to open

ADD REPLYlink written 13 months ago by Vijay Lakhujani3.5k

I'm able to open http://lindenb.github.io/jvarkit/PrettySam.html from two different locations.

ADD REPLYlink written 13 months ago by Pierre Lindenbaum116k
1

Now got it, many thanks!!

ADD REPLYlink written 13 months ago by Vijay Lakhujani3.5k
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